BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB030G12SP1|AL429289
(940 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig409 1751 0.0
>3x_Contig409
Length = 2404
Score = 1751 bits (882), Expect = 0.0
Identities = 930/942 (98%), Gaps = 4/942 (0%)
Strand = Plus / Plus
Query: 1 ttcacctaacgagttgcccgagtcccaagag-acaaacgcaccaaacctatcacgacctt 59
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 889 ttcacctaacgagttgcccgagtcccaagagcacaaacgcaccaaacctatcacgacctt 948
Query: 60 caccaacaacagccaatcttttaccctcaaaatcccaggatatatcagcgacaggaccag 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 949 caccaacaacagccaatcttttaccctcaaaatcccaggatatatcagcgacaggaccag 1008
Query: 120 cgagcacatgtagttccgacttaacgttgtactcaatttctccagacttatcgtcctgat 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1009 cgagcacatgtagttccgacttaacgttgtactcaatttctccagacttatcgtcctgat 1068
Query: 180 tccaagaccaaacgataactctaccggaatcatctcctgaagcaacatattgagacccct 239
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 1069 tccaagaccaaacgataactctaccggaatcatctcctgaagcaatatattgagacccct 1128
Query: 240 ggataggagaaaattttacaacagtgacattactggtaccatggccattgaattgaacga 299
||||| ||| |||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1129 ggatatgagtaaatctcacaacagtgacattactggtaccatggccattgaattgaacga 1188
Query: 300 catgttcaccatctaaagatctaatgatggcagatctaccgctaccataagctaaactgt 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1189 catgttcaccatctaaagatctaatgatggcagatctaccgctaccataagctaaactgt 1248
Query: 360 cagtctttggatcatatgataaatgtgtcgtaaagtttctctttgtagaagggagaggtg 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1249 cagtctttggatcatatgataaatgtgtcgtaaagtttctctttgtagaagggagaggtg 1308
Query: 420 caaaaacctttgctaaattaatcgaaaccatattatcgcgagatactagatcaattgact 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1309 caaaaacctttgctaaattaatcgaaaccatattatcgcgagatactagatcaattgact 1368
Query: 480 tttggaacactctgtaaacgcaccagaaagacctcttcctgactcaaacgtgtcctgttc 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1369 tttggaacactctgtaaacgcaccagaaagacctcttcctgactcaaacgtgtcctgttc 1428
Query: 540 tcatggtttagtttcttgataaactggtgagtataaataaattccatacatatggaatgt 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1429 tcatggtttagtttcttgataaactggtgagtataaataaattccatacatatggaatgt 1488
Query: 600 aaatagacgaaataataactactgggatgcagaaatacaaagaaaagatatcctaaatac 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1489 aaatagacgaaataataactactgggatgcagaaatacaaagaaaagatatcctaaatac 1548
Query: 660 cagttagtataatgaaagtggtattgctgaatacctgggaatcaagaaaatctggg-aac 718
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 1549 cagttagtataatgaaagtggtattgctgaatacctgggaatcaagaaaatctgggaaac 1608
Query: 719 caggttaaaagcagataaagggccttaaaggccttttatctgcytgtaaagtacagtgaa 778
||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||
Sbjct: 1609 caggttaaaagcagataaagggccttaaaggccctttatctgcttgtaaagtacagtgaa 1668
Query: 779 cggttattcttctctgaaaaatcacaatcaacgagattcttcgagtcttcaaagaaaaga 838
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1669 cggttattcttctctgaaaaatcacaatcaacgagattcttcgagtcttcaaagaaaaga 1728
Query: 839 aaccagattttgggaaaaaaaaaatgattgaagccttagctcatcgcatgggttgataaa 898
||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 1729 aaccagatttt-ggaaaaaaaaaatgattgaagccttagctcatcgcat-ggttgataaa 1786
Query: 899 atagatttccctgtwatttgcgagttatatcagtcggtttgg 940
|||||||||||||| |||||||||||||||||||||||||||
Sbjct: 1787 atagatttccctgtaatttgcgagttatatcagtcggtttgg 1828
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8209
Number of Sequences: 1807
Number of extensions: 8209
Number of successful extensions: 73
Number of sequences better than 1.0e-20: 1
length of query: 940
length of database: 10,358,551
effective HSP length: 16
effective length of query: 924
effective length of database: 10,329,639
effective search space: 9544586436
effective search space used: 9544586436
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)